NWB Workshops and Hackathons
Back to the projects listConvert Buzsaki lab data formats to NWB.
Key Investigators
Roman Huszar Peter Petersen
Project Description
Generate scripts that load data stored in an internal lab data format (“buzcode”) to NWB.
Objectives
The buzcode lab standard consists of different standards for storing .mat files depending on the type of data (behavior, LFP, spikes, stim). The goal is to use the MatNWB interface to create a function that process a recording session and load its contents into NWB.
Objective A. Load the spiking data Objective B. Load the LFP data Objective C. Load the stimulus data
Approach and Plan
Generate a MATLAB function that takes variable inputs specifying which parts of a recording session are to be converted and saved as NWB files. The plan is to provideuser’s who want to use the data with flexibility as to which parts of the data (spikes, stimulus times, etc.) are to be loaded.
Progress and Next Steps
Materials
Background and References
Dataset - juxtacellular stimulation of a CA1 pyramidal neuron while monitoring the rest of the population extracellularly. English et al., 2017 https://www.sciencedirect.com/science/article/pii/S0896627317309029?via%3Dihub