Sebi Rolotti (Losonczy Lab, Columbia University)
Our lab collects 2-photon imaging and extracellular electrophysiological data in awake behaving mice. Our overall goal is to increase the interoperability of our data structures and formats with those of NWB. We already have fairly well developed repositories for working with our data, including a public package for sequential imaging data (SIMA) as well as in-house lab analysis bundle (LAB) for associating and analyzing these various data formats. We therefore hope to allow for seamless import from and export to NWB using the APIs for these repos.
Source code for SIMA: https://github.com/losonczylab/sima
SIMA API Documentation: http://www.losonczylab.org/sima/1.3.2/
SIMA Publication: https://www.frontiersin.org/articles/10.3389/fninf.2014.00080/full
MWE Source code for LAB: https://github.com/losonczylab/Zaremba_NatNeurosci_2017/tree/master/losonczy_analysis_bundle/lab